FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1641188_a_at:

>probe:Drosophila_2:1641188_a_at:679:37; Interrogation_Position=1739; Antisense; ATCTCGAGGACATGCGCATGGAGGC
>probe:Drosophila_2:1641188_a_at:496:587; Interrogation_Position=1757; Antisense; TGGAGGCGGCGCACAAGAAACAAAA
>probe:Drosophila_2:1641188_a_at:273:521; Interrogation_Position=1789; Antisense; GTGGCGAAAATCAGCTCACGCTCCT
>probe:Drosophila_2:1641188_a_at:361:123; Interrogation_Position=1806; Antisense; ACGCTCCTAGGACGGTATTTCATCT
>probe:Drosophila_2:1641188_a_at:418:687; Interrogation_Position=1821; Antisense; TATTTCATCTCGACGTGGGCTAATC
>probe:Drosophila_2:1641188_a_at:576:655; Interrogation_Position=1841; Antisense; TAATCCGTCGCCATGTAAAGTGTAC
>probe:Drosophila_2:1641188_a_at:510:515; Interrogation_Position=1860; Antisense; GTGTACACCTGATTTATCTCTTGGG
>probe:Drosophila_2:1641188_a_at:295:461; Interrogation_Position=1870; Antisense; GATTTATCTCTTGGGCTTAGCAACG
>probe:Drosophila_2:1641188_a_at:353:709; Interrogation_Position=1900; Antisense; TTAAGCCCACTCATTAGTTTTTGTT
>probe:Drosophila_2:1641188_a_at:431:365; Interrogation_Position=2066; Antisense; GAATATCCATGGTTAATGCCACAAT
>probe:Drosophila_2:1641188_a_at:8:313; Interrogation_Position=2083; Antisense; GCCACAATGATTATAGCGGGCTCAT
>probe:Drosophila_2:1641188_a_at:260:701; Interrogation_Position=2148; Antisense; TTTTGTGTGCGGACGACTACATCGT
>probe:Drosophila_2:1641188_a_at:575:279; Interrogation_Position=2164; Antisense; CTACATCGTGTAGCTGCCATAGGAA
>probe:Drosophila_2:1641188_a_at:170:377; Interrogation_Position=2263; Antisense; GAAGCTCTTTAACTTACAATTGTCG

Paste this into a BLAST search page for me
ATCTCGAGGACATGCGCATGGAGGCTGGAGGCGGCGCACAAGAAACAAAAGTGGCGAAAATCAGCTCACGCTCCTACGCTCCTAGGACGGTATTTCATCTTATTTCATCTCGACGTGGGCTAATCTAATCCGTCGCCATGTAAAGTGTACGTGTACACCTGATTTATCTCTTGGGGATTTATCTCTTGGGCTTAGCAACGTTAAGCCCACTCATTAGTTTTTGTTGAATATCCATGGTTAATGCCACAATGCCACAATGATTATAGCGGGCTCATTTTTGTGTGCGGACGACTACATCGTCTACATCGTGTAGCTGCCATAGGAAGAAGCTCTTTAACTTACAATTGTCG

Full Affymetrix probeset data:

Annotations for 1641188_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720