FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1641215_s_at:

>probe:Drosophila_2:1641215_s_at:171:385; Interrogation_Position=1190; Antisense; GAACTCAACGGGATCCAGCAGCGAT
>probe:Drosophila_2:1641215_s_at:724:459; Interrogation_Position=1227; Antisense; GATTTTGCAGGACCCTCCGCTGGAA
>probe:Drosophila_2:1641215_s_at:671:295; Interrogation_Position=1253; Antisense; CGAACTGGAGACCAAGCGCTTGATA
>probe:Drosophila_2:1641215_s_at:18:345; Interrogation_Position=1270; Antisense; GCTTGATAGATTTCATTCGCGCAAA
>probe:Drosophila_2:1641215_s_at:545:211; Interrogation_Position=1314; Antisense; AAGACATACATTGCTCTTCACTCCT
>probe:Drosophila_2:1641215_s_at:160:711; Interrogation_Position=1330; Antisense; TTCACTCCTACTCTCAAATGCTAAT
>probe:Drosophila_2:1641215_s_at:242:219; Interrogation_Position=1352; Antisense; AATGTTCCCATATGGTTACACCAAG
>probe:Drosophila_2:1641215_s_at:87:251; Interrogation_Position=1373; Antisense; CAAGGAGCGGGTGTCCAACTACGAT
>probe:Drosophila_2:1641215_s_at:697:671; Interrogation_Position=1392; Antisense; TACGATGACCTGCAGGAGTTCGGCA
>probe:Drosophila_2:1641215_s_at:520:565; Interrogation_Position=1413; Antisense; GGCAAGAAGGCATCGGCAGCAATCA
>probe:Drosophila_2:1641215_s_at:710:601; Interrogation_Position=1474; Antisense; TGTTTGAGACCATCTATCCGTCGAG
>probe:Drosophila_2:1641215_s_at:668:429; Interrogation_Position=1527; Antisense; GAGGCGGGTATTCCGATTGCCTACA
>probe:Drosophila_2:1641215_s_at:284:397; Interrogation_Position=1575; Antisense; GACAGCCAGGACTTGTTCATTCTGC
>probe:Drosophila_2:1641215_s_at:12:145; Interrogation_Position=1638; Antisense; ACTGCCATTCGTGCCATCGTAGAGG

Paste this into a BLAST search page for me
GAACTCAACGGGATCCAGCAGCGATGATTTTGCAGGACCCTCCGCTGGAACGAACTGGAGACCAAGCGCTTGATAGCTTGATAGATTTCATTCGCGCAAAAAGACATACATTGCTCTTCACTCCTTTCACTCCTACTCTCAAATGCTAATAATGTTCCCATATGGTTACACCAAGCAAGGAGCGGGTGTCCAACTACGATTACGATGACCTGCAGGAGTTCGGCAGGCAAGAAGGCATCGGCAGCAATCATGTTTGAGACCATCTATCCGTCGAGGAGGCGGGTATTCCGATTGCCTACAGACAGCCAGGACTTGTTCATTCTGCACTGCCATTCGTGCCATCGTAGAGG

Full Affymetrix probeset data:

Annotations for 1641215_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720