FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1641224_s_at:

>probe:Drosophila_2:1641224_s_at:27:329; Interrogation_Position=1254; Antisense; GCGTTGCATCGTTATAAGCCCATTA
>probe:Drosophila_2:1641224_s_at:40:169; Interrogation_Position=1280; Antisense; AAAGGTTGGAATTCCAGCCGCCTCA
>probe:Drosophila_2:1641224_s_at:93:117; Interrogation_Position=1307; Antisense; AGCATCAACATCATCTACGACAACA
>probe:Drosophila_2:1641224_s_at:155:187; Interrogation_Position=1331; Antisense; AACAACATTGGCATCACCGGGAACT
>probe:Drosophila_2:1641224_s_at:52:385; Interrogation_Position=1351; Antisense; GAACTGCTGTCACTCCCGTTGCGGA
>probe:Drosophila_2:1641224_s_at:249:487; Interrogation_Position=1408; Antisense; GTAGCAGTTCGGCATACGGTCAACC
>probe:Drosophila_2:1641224_s_at:152:169; Interrogation_Position=1457; Antisense; AAAGGCCAGCTTGCTCAAGACACTT
>probe:Drosophila_2:1641224_s_at:473:251; Interrogation_Position=1472; Antisense; CAAGACACTTTAGGCTATGCAGCAA
>probe:Drosophila_2:1641224_s_at:463:389; Interrogation_Position=1561; Antisense; GAAACACCTCATGGCGTAGCTGAAG
>probe:Drosophila_2:1641224_s_at:462:457; Interrogation_Position=1608; Antisense; GTTGGACACGTTAACTGGCAATCAG
>probe:Drosophila_2:1641224_s_at:59:585; Interrogation_Position=1623; Antisense; TGGCAATCAGCTTTATTTGGGCCTA
>probe:Drosophila_2:1641224_s_at:233:691; Interrogation_Position=1638; Antisense; TTTGGGCCTATTTGGGAATTCTATA
>probe:Drosophila_2:1641224_s_at:469:363; Interrogation_Position=1653; Antisense; GAATTCTATAGTCCACAGTTGTGCA
>probe:Drosophila_2:1641224_s_at:103:681; Interrogation_Position=1680; Antisense; TATCGTACACGTGCAGTATTTGTTT

Paste this into a BLAST search page for me
GCGTTGCATCGTTATAAGCCCATTAAAAGGTTGGAATTCCAGCCGCCTCAAGCATCAACATCATCTACGACAACAAACAACATTGGCATCACCGGGAACTGAACTGCTGTCACTCCCGTTGCGGAGTAGCAGTTCGGCATACGGTCAACCAAAGGCCAGCTTGCTCAAGACACTTCAAGACACTTTAGGCTATGCAGCAAGAAACACCTCATGGCGTAGCTGAAGGTTGGACACGTTAACTGGCAATCAGTGGCAATCAGCTTTATTTGGGCCTATTTGGGCCTATTTGGGAATTCTATAGAATTCTATAGTCCACAGTTGTGCATATCGTACACGTGCAGTATTTGTTT

Full Affymetrix probeset data:

Annotations for 1641224_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720