FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1641233_a_at:

>probe:Drosophila_2:1641233_a_at:527:543; Interrogation_Position=2531; Antisense; GGATCTGACGGTGTACAACGGCGAT
>probe:Drosophila_2:1641233_a_at:474:63; Interrogation_Position=2554; Antisense; ATGTGGACAGCGTTAGCAGCTCGCC
>probe:Drosophila_2:1641233_a_at:440:353; Interrogation_Position=2569; Antisense; GCAGCTCGCCGGGAGTGTGCAAAAA
>probe:Drosophila_2:1641233_a_at:480:597; Interrogation_Position=2584; Antisense; TGTGCAAAAAGCTCCTTGCGCCGGA
>probe:Drosophila_2:1641233_a_at:137:305; Interrogation_Position=2604; Antisense; CCGGAGTTCAACTTCGATGCCATGA
>probe:Drosophila_2:1641233_a_at:135:615; Interrogation_Position=2626; Antisense; TGAAGCGAGCACTGGCGGAGCCAAC
>probe:Drosophila_2:1641233_a_at:14:99; Interrogation_Position=2683; Antisense; AGATGCAGATAGTGCGCACCTTCCG
>probe:Drosophila_2:1641233_a_at:572:573; Interrogation_Position=2712; Antisense; GGCGAGTTTGACGACCTTATGAGAC
>probe:Drosophila_2:1641233_a_at:175:109; Interrogation_Position=2741; Antisense; AGAACCTAAGCACGATCTCATCCAG
>probe:Drosophila_2:1641233_a_at:569:263; Interrogation_Position=2763; Antisense; CAGAACCGCCTTAACGAGCTTTTCA
>probe:Drosophila_2:1641233_a_at:558:115; Interrogation_Position=2779; Antisense; AGCTTTTCAACTCGCTAGCCGTGGA
>probe:Drosophila_2:1641233_a_at:251:219; Interrogation_Position=2829; Antisense; AAGTCCAGTCAGTTGCAAGCCAGCA
>probe:Drosophila_2:1641233_a_at:221:425; Interrogation_Position=2871; Antisense; GAGACGAACTTTCCGGAACTCTTCT
>probe:Drosophila_2:1641233_a_at:684:187; Interrogation_Position=3060; Antisense; AACGACCCCGAATATGTACTTTGAT

Paste this into a BLAST search page for me
GGATCTGACGGTGTACAACGGCGATATGTGGACAGCGTTAGCAGCTCGCCGCAGCTCGCCGGGAGTGTGCAAAAATGTGCAAAAAGCTCCTTGCGCCGGACCGGAGTTCAACTTCGATGCCATGATGAAGCGAGCACTGGCGGAGCCAACAGATGCAGATAGTGCGCACCTTCCGGGCGAGTTTGACGACCTTATGAGACAGAACCTAAGCACGATCTCATCCAGCAGAACCGCCTTAACGAGCTTTTCAAGCTTTTCAACTCGCTAGCCGTGGAAAGTCCAGTCAGTTGCAAGCCAGCAGAGACGAACTTTCCGGAACTCTTCTAACGACCCCGAATATGTACTTTGAT

Full Affymetrix probeset data:

Annotations for 1641233_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720