FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1641236_s_at:

>probe:Drosophila_2:1641236_s_at:326:577; Interrogation_Position=1641; Antisense; GGCGCCAATTACACGTTCTTTGTGC
>probe:Drosophila_2:1641236_s_at:128:645; Interrogation_Position=1657; Antisense; TCTTTGTGCCAGAGGATCGGGCCTT
>probe:Drosophila_2:1641236_s_at:397:231; Interrogation_Position=1742; Antisense; AATGCTGCTGAACCACTTCGTTAAG
>probe:Drosophila_2:1641236_s_at:474:31; Interrogation_Position=1777; Antisense; ATAACCGTGATCTGCGCGACAATGA
>probe:Drosophila_2:1641236_s_at:715:643; Interrogation_Position=1804; Antisense; TCTTTGAGACGATCGGCGGAGGCCA
>probe:Drosophila_2:1641236_s_at:161:549; Interrogation_Position=1821; Antisense; GGAGGCCACATTAAGATCACCCGTA
>probe:Drosophila_2:1641236_s_at:154:675; Interrogation_Position=1862; Antisense; TACCAGCGTCAATAATGCCCAGATT
>probe:Drosophila_2:1641236_s_at:593:471; Interrogation_Position=1901; Antisense; GTTCGTATACAACTTGGGCACCATG
>probe:Drosophila_2:1641236_s_at:251:593; Interrogation_Position=1915; Antisense; TGGGCACCATGTACTACCTGGACGA
>probe:Drosophila_2:1641236_s_at:279:105; Interrogation_Position=1987; Antisense; AGACGAGATCCAATCGGCACGGCAG
>probe:Drosophila_2:1641236_s_at:427:323; Interrogation_Position=2050; Antisense; GCGACGTGGAAATCGTGCCCAACGA
>probe:Drosophila_2:1641236_s_at:256:403; Interrogation_Position=2100; Antisense; GACTATGCCATCCACGGTGATGACG
>probe:Drosophila_2:1641236_s_at:723:443; Interrogation_Position=2136; Antisense; GATGAGATTATCACGCCCAAGGCGC
>probe:Drosophila_2:1641236_s_at:168:505; Interrogation_Position=2166; Antisense; GTCCAGATCTATGAGTTGCCCAAGT

Paste this into a BLAST search page for me
GGCGCCAATTACACGTTCTTTGTGCTCTTTGTGCCAGAGGATCGGGCCTTAATGCTGCTGAACCACTTCGTTAAGATAACCGTGATCTGCGCGACAATGATCTTTGAGACGATCGGCGGAGGCCAGGAGGCCACATTAAGATCACCCGTATACCAGCGTCAATAATGCCCAGATTGTTCGTATACAACTTGGGCACCATGTGGGCACCATGTACTACCTGGACGAAGACGAGATCCAATCGGCACGGCAGGCGACGTGGAAATCGTGCCCAACGAGACTATGCCATCCACGGTGATGACGGATGAGATTATCACGCCCAAGGCGCGTCCAGATCTATGAGTTGCCCAAGT

Full Affymetrix probeset data:

Annotations for 1641236_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720