FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1641274_a_at:

>probe:Drosophila_2:1641274_a_at:543:613; Interrogation_Position=1859; Antisense; TGAAGTGCCCATTTACAGAAGTAAC
>probe:Drosophila_2:1641274_a_at:548:369; Interrogation_Position=1876; Antisense; GAAGTAACTTGTCTTCCGATCACCG
>probe:Drosophila_2:1641274_a_at:194:633; Interrogation_Position=1890; Antisense; TCCGATCACCGGCAGATGACCTACA
>probe:Drosophila_2:1641274_a_at:169:57; Interrogation_Position=1905; Antisense; ATGACCTACATCTTCTTCACGAGTA
>probe:Drosophila_2:1641274_a_at:628:125; Interrogation_Position=1982; Antisense; AGCCGTCTGTTACATCATTCTCTAG
>probe:Drosophila_2:1641274_a_at:722:11; Interrogation_Position=1998; Antisense; ATTCTCTAGACTCTTTCTTGGCAAC
>probe:Drosophila_2:1641274_a_at:435:43; Interrogation_Position=2026; Antisense; ATCGTTTTCAATTGTCGGTGTCCAC
>probe:Drosophila_2:1641274_a_at:120:597; Interrogation_Position=2044; Antisense; TGTCCACGCTGGAGGTCAGTCTCGG
>probe:Drosophila_2:1641274_a_at:698:537; Interrogation_Position=2057; Antisense; GGTCAGTCTCGGTTGGATTTACATG
>probe:Drosophila_2:1641274_a_at:678:509; Interrogation_Position=2151; Antisense; GTGAGTTGATGACCATGCCAGCTTC
>probe:Drosophila_2:1641274_a_at:400:49; Interrogation_Position=2165; Antisense; ATGCCAGCTTCCACATTTGTCTGTG
>probe:Drosophila_2:1641274_a_at:196:21; Interrogation_Position=2179; Antisense; ATTTGTCTGTGCTCATGTTCGTCTG
>probe:Drosophila_2:1641274_a_at:659:717; Interrogation_Position=2196; Antisense; TTCGTCTGGTGTTGCTTATGCTGAA
>probe:Drosophila_2:1641274_a_at:304:695; Interrogation_Position=2224; Antisense; TTTCTTTTGCCTTGGTTAGTTCCTG

Paste this into a BLAST search page for me
TGAAGTGCCCATTTACAGAAGTAACGAAGTAACTTGTCTTCCGATCACCGTCCGATCACCGGCAGATGACCTACAATGACCTACATCTTCTTCACGAGTAAGCCGTCTGTTACATCATTCTCTAGATTCTCTAGACTCTTTCTTGGCAACATCGTTTTCAATTGTCGGTGTCCACTGTCCACGCTGGAGGTCAGTCTCGGGGTCAGTCTCGGTTGGATTTACATGGTGAGTTGATGACCATGCCAGCTTCATGCCAGCTTCCACATTTGTCTGTGATTTGTCTGTGCTCATGTTCGTCTGTTCGTCTGGTGTTGCTTATGCTGAATTTCTTTTGCCTTGGTTAGTTCCTG

Full Affymetrix probeset data:

Annotations for 1641274_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720