FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1641300_s_at:

>probe:Drosophila_2:1641300_s_at:458:311; Interrogation_Position=1000; Antisense; GCCCCTAATGGATCTTTGCCGAAGA
>probe:Drosophila_2:1641300_s_at:162:451; Interrogation_Position=1010; Antisense; GATCTTTGCCGAAGAACAATTCGTC
>probe:Drosophila_2:1641300_s_at:22:239; Interrogation_Position=1027; Antisense; AATTCGTCAAAAAATTGGTCGCACA
>probe:Drosophila_2:1641300_s_at:598:591; Interrogation_Position=1042; Antisense; TGGTCGCACAAACTTGGAGGAGCAC
>probe:Drosophila_2:1641300_s_at:375:549; Interrogation_Position=1057; Antisense; GGAGGAGCACATTCAACAGCTTCAA
>probe:Drosophila_2:1641300_s_at:61:189; Interrogation_Position=1071; Antisense; AACAGCTTCAACTTCCTTTATCAAT
>probe:Drosophila_2:1641300_s_at:249:249; Interrogation_Position=1155; Antisense; CAATTTCAATTTTTGCTGCATGTGA
>probe:Drosophila_2:1641300_s_at:343:97; Interrogation_Position=1222; Antisense; AGATCAATGTTTGTCTGTCCTCCAA
>probe:Drosophila_2:1641300_s_at:79:479; Interrogation_Position=1230; Antisense; GTTTGTCTGTCCTCCAACAGGAAAA
>probe:Drosophila_2:1641300_s_at:224:491; Interrogation_Position=1337; Antisense; GTACACGGAATGACATCTCATCTTG
>probe:Drosophila_2:1641300_s_at:334:401; Interrogation_Position=1348; Antisense; GACATCTCATCTTGCAATAAATTGG
>probe:Drosophila_2:1641300_s_at:54:553; Interrogation_Position=1371; Antisense; GGAGAATCGAGTTTCTTCATGTAAC
>probe:Drosophila_2:1641300_s_at:357:181; Interrogation_Position=1404; Antisense; AAAACTATACTCACTTCGTGTTATA
>probe:Drosophila_2:1641300_s_at:285:381; Interrogation_Position=992; Antisense; GAACCCTTGCCCCTAATGGATCTTT

Paste this into a BLAST search page for me
GCCCCTAATGGATCTTTGCCGAAGAGATCTTTGCCGAAGAACAATTCGTCAATTCGTCAAAAAATTGGTCGCACATGGTCGCACAAACTTGGAGGAGCACGGAGGAGCACATTCAACAGCTTCAAAACAGCTTCAACTTCCTTTATCAATCAATTTCAATTTTTGCTGCATGTGAAGATCAATGTTTGTCTGTCCTCCAAGTTTGTCTGTCCTCCAACAGGAAAAGTACACGGAATGACATCTCATCTTGGACATCTCATCTTGCAATAAATTGGGGAGAATCGAGTTTCTTCATGTAACAAAACTATACTCACTTCGTGTTATAGAACCCTTGCCCCTAATGGATCTTT

Full Affymetrix probeset data:

Annotations for 1641300_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720