FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1641304_s_at:

>probe:Drosophila_2:1641304_s_at:392:555; Interrogation_Position=2954; Antisense; GGACCCTTCAGAAAATCGTTAGTAT
>probe:Drosophila_2:1641304_s_at:374:493; Interrogation_Position=3028; Antisense; GTAAGCATACATACACGGTGATATA
>probe:Drosophila_2:1641304_s_at:104:459; Interrogation_Position=3047; Antisense; GATATATCTCACATGTAACTTCGAT
>probe:Drosophila_2:1641304_s_at:382:27; Interrogation_Position=3078; Antisense; ATAGCTTTCGCTTAAGTTCGTTGAT
>probe:Drosophila_2:1641304_s_at:656:243; Interrogation_Position=3106; Antisense; AATTTGGTGTTCTCATTCGTCAGCC
>probe:Drosophila_2:1641304_s_at:416:495; Interrogation_Position=3124; Antisense; GTCAGCCATAGTTTTTAGCCATTTA
>probe:Drosophila_2:1641304_s_at:229:297; Interrogation_Position=3164; Antisense; CGACAGAAATGCCTCAAATGTTTAA
>probe:Drosophila_2:1641304_s_at:306:261; Interrogation_Position=3222; Antisense; CACCGTATTTTTACACTCTCATTCG
>probe:Drosophila_2:1641304_s_at:645:291; Interrogation_Position=3245; Antisense; CGTAATTCAATGTATATGCCACTTT
>probe:Drosophila_2:1641304_s_at:334:49; Interrogation_Position=3260; Antisense; ATGCCACTTTTACACCAGTGCTACA
>probe:Drosophila_2:1641304_s_at:677:453; Interrogation_Position=3299; Antisense; GATATACTCTTTGTAATACCAGCTG
>probe:Drosophila_2:1641304_s_at:355:27; Interrogation_Position=3314; Antisense; ATACCAGCTGTCTCATACAATTTCA
>probe:Drosophila_2:1641304_s_at:728:425; Interrogation_Position=3359; Antisense; TAGTTGGTAACGCACAGCTAAAGTT
>probe:Drosophila_2:1641304_s_at:713:661; Interrogation_Position=3386; Antisense; TAAATGGGCTGTGGCAAACGGGCCT

Paste this into a BLAST search page for me
GGACCCTTCAGAAAATCGTTAGTATGTAAGCATACATACACGGTGATATAGATATATCTCACATGTAACTTCGATATAGCTTTCGCTTAAGTTCGTTGATAATTTGGTGTTCTCATTCGTCAGCCGTCAGCCATAGTTTTTAGCCATTTACGACAGAAATGCCTCAAATGTTTAACACCGTATTTTTACACTCTCATTCGCGTAATTCAATGTATATGCCACTTTATGCCACTTTTACACCAGTGCTACAGATATACTCTTTGTAATACCAGCTGATACCAGCTGTCTCATACAATTTCATAGTTGGTAACGCACAGCTAAAGTTTAAATGGGCTGTGGCAAACGGGCCT

Full Affymetrix probeset data:

Annotations for 1641304_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720