FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1641309_s_at:

>probe:Drosophila_2:1641309_s_at:113:337; Interrogation_Position=3118; Antisense; GCTGCGAGCGGCTATAAGAGCTTCT
>probe:Drosophila_2:1641309_s_at:93:249; Interrogation_Position=3146; Antisense; CAATTCCGCTTTGACTGGTTCATCA
>probe:Drosophila_2:1641309_s_at:214:39; Interrogation_Position=3172; Antisense; ATCTAGAACCGCTTTGGAGCTACAG
>probe:Drosophila_2:1641309_s_at:342:667; Interrogation_Position=3192; Antisense; TACAGCGTCGCTGCAACACGTTGAT
>probe:Drosophila_2:1641309_s_at:318:357; Interrogation_Position=3204; Antisense; GCAACACGTTGATTACCCTTATTGA
>probe:Drosophila_2:1641309_s_at:47:169; Interrogation_Position=3277; Antisense; AAAGGCACCAAAGGGCAGCGTGTCC
>probe:Drosophila_2:1641309_s_at:546:563; Interrogation_Position=3311; Antisense; GGAAGTGCCAGCTCGAACACTCCAG
>probe:Drosophila_2:1641309_s_at:311:435; Interrogation_Position=3377; Antisense; GAGGTGGTGGCAACCAGTTCCAACT
>probe:Drosophila_2:1641309_s_at:3:703; Interrogation_Position=3443; Antisense; TTTTCTGAGATTCGGCTCTACACTC
>probe:Drosophila_2:1641309_s_at:451:279; Interrogation_Position=3458; Antisense; CTCTACACTCAGCACTAGGCAGTTA
>probe:Drosophila_2:1641309_s_at:465:241; Interrogation_Position=3531; Antisense; AATAGTTCATATCTCACGCCGGAAG
>probe:Drosophila_2:1641309_s_at:22:261; Interrogation_Position=3545; Antisense; CACGCCGGAAGCAATATCACACCAA
>probe:Drosophila_2:1641309_s_at:465:403; Interrogation_Position=3618; Antisense; GACTACATTACTATTGCGTGCCGCT
>probe:Drosophila_2:1641309_s_at:68:507; Interrogation_Position=3635; Antisense; GTGCCGCTGTATTCTATTCCAAATA

Paste this into a BLAST search page for me
GCTGCGAGCGGCTATAAGAGCTTCTCAATTCCGCTTTGACTGGTTCATCAATCTAGAACCGCTTTGGAGCTACAGTACAGCGTCGCTGCAACACGTTGATGCAACACGTTGATTACCCTTATTGAAAAGGCACCAAAGGGCAGCGTGTCCGGAAGTGCCAGCTCGAACACTCCAGGAGGTGGTGGCAACCAGTTCCAACTTTTTCTGAGATTCGGCTCTACACTCCTCTACACTCAGCACTAGGCAGTTAAATAGTTCATATCTCACGCCGGAAGCACGCCGGAAGCAATATCACACCAAGACTACATTACTATTGCGTGCCGCTGTGCCGCTGTATTCTATTCCAAATA

Full Affymetrix probeset data:

Annotations for 1641309_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720