FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1641321_a_at:

>probe:Drosophila_2:1641321_a_at:559:265; Interrogation_Position=2832; Antisense; CAGATAGGATCGGACGTTCGGACGT
>probe:Drosophila_2:1641321_a_at:429:137; Interrogation_Position=2845; Antisense; ACGTTCGGACGTGAGAGATTTAGCA
>probe:Drosophila_2:1641321_a_at:276:687; Interrogation_Position=2899; Antisense; TATATCGCATATATCTCGTTAATGT
>probe:Drosophila_2:1641321_a_at:487:513; Interrogation_Position=2971; Antisense; GTGTATTCATTTATTGCCATTTTGT
>probe:Drosophila_2:1641321_a_at:635:497; Interrogation_Position=3002; Antisense; GTCATTCTAGCACTTTTCTACACAC
>probe:Drosophila_2:1641321_a_at:381:355; Interrogation_Position=3011; Antisense; GCACTTTTCTACACACAGCATATTT
>probe:Drosophila_2:1641321_a_at:675:473; Interrogation_Position=3046; Antisense; GTTCACATACAGCTTGATAACACTA
>probe:Drosophila_2:1641321_a_at:603:321; Interrogation_Position=3128; Antisense; GCGGTTTTAACGAGATTCCCACAGA
>probe:Drosophila_2:1641321_a_at:575:427; Interrogation_Position=3139; Antisense; GAGATTCCCACAGAGAATGCAGTCT
>probe:Drosophila_2:1641321_a_at:124:109; Interrogation_Position=3152; Antisense; AGAATGCAGTCTTATTTTACGCCAA
>probe:Drosophila_2:1641321_a_at:327:715; Interrogation_Position=3180; Antisense; TTCGAAATGGCTTTACGTTTTTGCA
>probe:Drosophila_2:1641321_a_at:685:341; Interrogation_Position=3189; Antisense; GCTTTACGTTTTTGCATTTTGTTCA
>probe:Drosophila_2:1641321_a_at:171:515; Interrogation_Position=3310; Antisense; GTGTATATACCAAACCTAAGAGAAG
>probe:Drosophila_2:1641321_a_at:13:351; Interrogation_Position=3359; Antisense; GCAGTCATGCAAATACAAGCGATTA

Paste this into a BLAST search page for me
CAGATAGGATCGGACGTTCGGACGTACGTTCGGACGTGAGAGATTTAGCATATATCGCATATATCTCGTTAATGTGTGTATTCATTTATTGCCATTTTGTGTCATTCTAGCACTTTTCTACACACGCACTTTTCTACACACAGCATATTTGTTCACATACAGCTTGATAACACTAGCGGTTTTAACGAGATTCCCACAGAGAGATTCCCACAGAGAATGCAGTCTAGAATGCAGTCTTATTTTACGCCAATTCGAAATGGCTTTACGTTTTTGCAGCTTTACGTTTTTGCATTTTGTTCAGTGTATATACCAAACCTAAGAGAAGGCAGTCATGCAAATACAAGCGATTA

Full Affymetrix probeset data:

Annotations for 1641321_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720