FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1641344_a_at:

>probe:Drosophila_2:1641344_a_at:107:515; Interrogation_Position=3092; Antisense; GTGTCCTTAGGGTATTTTGCCAGCT
>probe:Drosophila_2:1641344_a_at:645:313; Interrogation_Position=3110; Antisense; GCCAGCTACTTAGTTTGACCGACGG
>probe:Drosophila_2:1641344_a_at:241:133; Interrogation_Position=3127; Antisense; ACCGACGGACGTTGGACATTGTACA
>probe:Drosophila_2:1641344_a_at:543:557; Interrogation_Position=3140; Antisense; GGACATTGTACATACGCGCTTTAAG
>probe:Drosophila_2:1641344_a_at:73:699; Interrogation_Position=3180; Antisense; TTTTTTGTGGGTTCAGGCAGATCCA
>probe:Drosophila_2:1641344_a_at:532:567; Interrogation_Position=3195; Antisense; GGCAGATCCAGGACAAGGCATCCTT
>probe:Drosophila_2:1641344_a_at:235:181; Interrogation_Position=3228; Antisense; AAAAACCAACTCAGCCACACTTTGA
>probe:Drosophila_2:1641344_a_at:449:423; Interrogation_Position=3251; Antisense; GAGAACCTAGAAGTCCCCTATACAA
>probe:Drosophila_2:1641344_a_at:688:83; Interrogation_Position=3276; Antisense; AGTGTAGCTGAATTGGCTTTTGCCA
>probe:Drosophila_2:1641344_a_at:474:583; Interrogation_Position=3289; Antisense; TGGCTTTTGCCAAACATTTTCCCCT
>probe:Drosophila_2:1641344_a_at:342:273; Interrogation_Position=3303; Antisense; CATTTTCCCCTTTAGCTTAGATTCT
>probe:Drosophila_2:1641344_a_at:299:277; Interrogation_Position=3318; Antisense; CTTAGATTCTCTCAGTGCCACATTA
>probe:Drosophila_2:1641344_a_at:68:443; Interrogation_Position=3412; Antisense; GATGTTTTCATTAGAGTAGCCTCTT
>probe:Drosophila_2:1641344_a_at:708:271; Interrogation_Position=3504; Antisense; CATAGCGTCTAAGCATTACATTGTA

Paste this into a BLAST search page for me
GTGTCCTTAGGGTATTTTGCCAGCTGCCAGCTACTTAGTTTGACCGACGGACCGACGGACGTTGGACATTGTACAGGACATTGTACATACGCGCTTTAAGTTTTTTGTGGGTTCAGGCAGATCCAGGCAGATCCAGGACAAGGCATCCTTAAAAACCAACTCAGCCACACTTTGAGAGAACCTAGAAGTCCCCTATACAAAGTGTAGCTGAATTGGCTTTTGCCATGGCTTTTGCCAAACATTTTCCCCTCATTTTCCCCTTTAGCTTAGATTCTCTTAGATTCTCTCAGTGCCACATTAGATGTTTTCATTAGAGTAGCCTCTTCATAGCGTCTAAGCATTACATTGTA

Full Affymetrix probeset data:

Annotations for 1641344_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720