FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1641377_a_at:

>probe:Drosophila_2:1641377_a_at:531:609; Interrogation_Position=4555; Antisense; TGAGCGCTTCACAGAGATCGGACAT
>probe:Drosophila_2:1641377_a_at:384:451; Interrogation_Position=4570; Antisense; GATCGGACATATGCCCAACCTGAAT
>probe:Drosophila_2:1641377_a_at:293:555; Interrogation_Position=4631; Antisense; GGAGCCAATCAGAGCGCATCGAATC
>probe:Drosophila_2:1641377_a_at:270:41; Interrogation_Position=4648; Antisense; ATCGAATCGGGCCTCAAACGCTTTT
>probe:Drosophila_2:1641377_a_at:558:59; Interrogation_Position=4688; Antisense; ATGTTCGGCGGCTCATTACACAAGA
>probe:Drosophila_2:1641377_a_at:33:667; Interrogation_Position=4704; Antisense; TACACAAGACATTTGCCACGGGCAA
>probe:Drosophila_2:1641377_a_at:353:347; Interrogation_Position=4737; Antisense; GCATGTGCCAGCTGCCAGTGATAAA
>probe:Drosophila_2:1641377_a_at:649:663; Interrogation_Position=4758; Antisense; TAAATCCGATGCGTAGCACCAACCA
>probe:Drosophila_2:1641377_a_at:540:101; Interrogation_Position=4782; Antisense; AGAGCAGCCACCAGTTCGAGGATCC
>probe:Drosophila_2:1641377_a_at:455:373; Interrogation_Position=4922; Antisense; GAAGTCTGACCATGGTGGCCGAGTC
>probe:Drosophila_2:1641377_a_at:368:145; Interrogation_Position=4976; Antisense; ACTCCAAGCCTCCTGTGATTAGTTG
>probe:Drosophila_2:1641377_a_at:201:671; Interrogation_Position=5065; Antisense; TAGCCAAATGCGTGGGACCCTCGAA
>probe:Drosophila_2:1641377_a_at:425:715; Interrogation_Position=5092; Antisense; TTCGGTGGTCCATTAAGTAGCCTAA
>probe:Drosophila_2:1641377_a_at:586:487; Interrogation_Position=5108; Antisense; GTAGCCTAAGAATTGCACCACTGAC

Paste this into a BLAST search page for me
TGAGCGCTTCACAGAGATCGGACATGATCGGACATATGCCCAACCTGAATGGAGCCAATCAGAGCGCATCGAATCATCGAATCGGGCCTCAAACGCTTTTATGTTCGGCGGCTCATTACACAAGATACACAAGACATTTGCCACGGGCAAGCATGTGCCAGCTGCCAGTGATAAATAAATCCGATGCGTAGCACCAACCAAGAGCAGCCACCAGTTCGAGGATCCGAAGTCTGACCATGGTGGCCGAGTCACTCCAAGCCTCCTGTGATTAGTTGTAGCCAAATGCGTGGGACCCTCGAATTCGGTGGTCCATTAAGTAGCCTAAGTAGCCTAAGAATTGCACCACTGAC

Full Affymetrix probeset data:

Annotations for 1641377_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720