FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1641380_a_at:

>probe:Drosophila_2:1641380_a_at:413:685; Interrogation_Position=3437; Antisense; TATATTCGAAAGTCTTGGTCCTAAA
>probe:Drosophila_2:1641380_a_at:682:527; Interrogation_Position=3496; Antisense; GGGACACAAATTAATTGCAATCTTT
>probe:Drosophila_2:1641380_a_at:395:231; Interrogation_Position=3572; Antisense; AATGAGCAAGCAAAACTATTAGCAA
>probe:Drosophila_2:1641380_a_at:439:181; Interrogation_Position=3632; Antisense; AAAACAGCGAACTCCTAGCCAAGTA
>probe:Drosophila_2:1641380_a_at:541:379; Interrogation_Position=3640; Antisense; GAACTCCTAGCCAAGTAAGTTTGAA
>probe:Drosophila_2:1641380_a_at:204:687; Interrogation_Position=3685; Antisense; TATATTAGCGTAACTTTAGCATTGT
>probe:Drosophila_2:1641380_a_at:181:115; Interrogation_Position=3702; Antisense; AGCATTGTTAGTTGCAATTGTTGCA
>probe:Drosophila_2:1641380_a_at:92:351; Interrogation_Position=3724; Antisense; GCAGTTTTTCGATTCAACACCACAC
>probe:Drosophila_2:1641380_a_at:161:623; Interrogation_Position=3765; Antisense; TCAAATCGAACAACAAAAGGCCGTT
>probe:Drosophila_2:1641380_a_at:204:477; Interrogation_Position=3840; Antisense; GTTTACGTTGGCCTAAAGACGATGC
>probe:Drosophila_2:1641380_a_at:415:465; Interrogation_Position=3846; Antisense; GTTGGCCTAAAGACGATGCAGCATT
>probe:Drosophila_2:1641380_a_at:341:105; Interrogation_Position=3856; Antisense; AGACGATGCAGCATTTGGCTTGCAA
>probe:Drosophila_2:1641380_a_at:270:351; Interrogation_Position=3863; Antisense; GCAGCATTTGGCTTGCAAGGAGAAA
>probe:Drosophila_2:1641380_a_at:21:175; Interrogation_Position=3904; Antisense; AAACGTTTACTATATTACTAGCCAT

Paste this into a BLAST search page for me
TATATTCGAAAGTCTTGGTCCTAAAGGGACACAAATTAATTGCAATCTTTAATGAGCAAGCAAAACTATTAGCAAAAAACAGCGAACTCCTAGCCAAGTAGAACTCCTAGCCAAGTAAGTTTGAATATATTAGCGTAACTTTAGCATTGTAGCATTGTTAGTTGCAATTGTTGCAGCAGTTTTTCGATTCAACACCACACTCAAATCGAACAACAAAAGGCCGTTGTTTACGTTGGCCTAAAGACGATGCGTTGGCCTAAAGACGATGCAGCATTAGACGATGCAGCATTTGGCTTGCAAGCAGCATTTGGCTTGCAAGGAGAAAAAACGTTTACTATATTACTAGCCAT

Full Affymetrix probeset data:

Annotations for 1641380_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720