FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1641396_a_at:

>probe:Drosophila_2:1641396_a_at:720:235; Interrogation_Position=4107; Antisense; AATCTCTGCAACACTGGATACGTCC
>probe:Drosophila_2:1641396_a_at:300:543; Interrogation_Position=4122; Antisense; GGATACGTCCGTTCTCGTTCTCGTT
>probe:Drosophila_2:1641396_a_at:357:451; Interrogation_Position=4198; Antisense; GATCGATCCTGCCTCTTTCTGATGT
>probe:Drosophila_2:1641396_a_at:670:61; Interrogation_Position=4219; Antisense; ATGTCTCTTTCTTTGTGACCTCTGA
>probe:Drosophila_2:1641396_a_at:294:321; Interrogation_Position=4251; Antisense; GCCCAACGATAATTTTAGTCAGCAG
>probe:Drosophila_2:1641396_a_at:489:495; Interrogation_Position=4268; Antisense; GTCAGCAGACGCATGTATATATTTT
>probe:Drosophila_2:1641396_a_at:200:579; Interrogation_Position=4376; Antisense; TGGTATTAGCCCACATATGTACATT
>probe:Drosophila_2:1641396_a_at:46:487; Interrogation_Position=4415; Antisense; GTACGTATGTGTTGAGACCTTGGAA
>probe:Drosophila_2:1641396_a_at:281:171; Interrogation_Position=4438; Antisense; AAAGATACTCCAAAACTGCACCCAA
>probe:Drosophila_2:1641396_a_at:303:311; Interrogation_Position=4494; Antisense; GCCAATCCATTTAGTAAGCCAACCC
>probe:Drosophila_2:1641396_a_at:574:659; Interrogation_Position=4508; Antisense; TAAGCCAACCCATGCTGCTCGGATA
>probe:Drosophila_2:1641396_a_at:462:489; Interrogation_Position=4547; Antisense; GTACTGGCAGCTATTTTACAGCGAC
>probe:Drosophila_2:1641396_a_at:522:665; Interrogation_Position=4563; Antisense; TACAGCGACAACACTTTCGATTGTT
>probe:Drosophila_2:1641396_a_at:99:95; Interrogation_Position=4651; Antisense; AGTTGAACGCGCAGCAAGTTTTACA

Paste this into a BLAST search page for me
AATCTCTGCAACACTGGATACGTCCGGATACGTCCGTTCTCGTTCTCGTTGATCGATCCTGCCTCTTTCTGATGTATGTCTCTTTCTTTGTGACCTCTGAGCCCAACGATAATTTTAGTCAGCAGGTCAGCAGACGCATGTATATATTTTTGGTATTAGCCCACATATGTACATTGTACGTATGTGTTGAGACCTTGGAAAAAGATACTCCAAAACTGCACCCAAGCCAATCCATTTAGTAAGCCAACCCTAAGCCAACCCATGCTGCTCGGATAGTACTGGCAGCTATTTTACAGCGACTACAGCGACAACACTTTCGATTGTTAGTTGAACGCGCAGCAAGTTTTACA

Full Affymetrix probeset data:

Annotations for 1641396_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720