FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1641398_s_at:

>probe:Drosophila_2:1641398_s_at:288:579; Interrogation_Position=2352; Antisense; TGGCCACCAGTTCTGGGTCTTAGTC
>probe:Drosophila_2:1641398_s_at:597:285; Interrogation_Position=2364; Antisense; CTGGGTCTTAGTCTGATCATCCTGC
>probe:Drosophila_2:1641398_s_at:391:381; Interrogation_Position=2414; Antisense; GAACGCCCGGAATCAGGCGCGCTAT
>probe:Drosophila_2:1641398_s_at:145:585; Interrogation_Position=2448; Antisense; TGGCAGCGCTACAGCACCCAGGTGC
>probe:Drosophila_2:1641398_s_at:37:667; Interrogation_Position=2478; Antisense; TACATCCTGCCCAGGGTCTACTAAG
>probe:Drosophila_2:1641398_s_at:530:263; Interrogation_Position=2489; Antisense; CAGGGTCTACTAAGCCGGGAGTTGA
>probe:Drosophila_2:1641398_s_at:470:549; Interrogation_Position=2506; Antisense; GGAGTTGACCCTTCTATTTTCTGTG
>probe:Drosophila_2:1641398_s_at:143:715; Interrogation_Position=2524; Antisense; TTCTGTGGCCATTCTTATTTTTATT
>probe:Drosophila_2:1641398_s_at:448:653; Interrogation_Position=2606; Antisense; TAATTCATATTGTTCTAGACCACCA
>probe:Drosophila_2:1641398_s_at:143:725; Interrogation_Position=2615; Antisense; TTGTTCTAGACCACCAATACAGCCC
>probe:Drosophila_2:1641398_s_at:79:277; Interrogation_Position=2649; Antisense; CTTCAGCCCATTACTTTTAGTAACA
>probe:Drosophila_2:1641398_s_at:268:243; Interrogation_Position=2675; Antisense; AATTTGATTTTACACTCGCCGACAC
>probe:Drosophila_2:1641398_s_at:33:645; Interrogation_Position=2754; Antisense; TCTAGCTGTACGAACTTATGCGCTT
>probe:Drosophila_2:1641398_s_at:170:705; Interrogation_Position=2769; Antisense; TTATGCGCTTAAGATCTAGACATCT

Paste this into a BLAST search page for me
TGGCCACCAGTTCTGGGTCTTAGTCCTGGGTCTTAGTCTGATCATCCTGCGAACGCCCGGAATCAGGCGCGCTATTGGCAGCGCTACAGCACCCAGGTGCTACATCCTGCCCAGGGTCTACTAAGCAGGGTCTACTAAGCCGGGAGTTGAGGAGTTGACCCTTCTATTTTCTGTGTTCTGTGGCCATTCTTATTTTTATTTAATTCATATTGTTCTAGACCACCATTGTTCTAGACCACCAATACAGCCCCTTCAGCCCATTACTTTTAGTAACAAATTTGATTTTACACTCGCCGACACTCTAGCTGTACGAACTTATGCGCTTTTATGCGCTTAAGATCTAGACATCT

Full Affymetrix probeset data:

Annotations for 1641398_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720