FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1641442_a_at:

>probe:Drosophila_2:1641442_a_at:366:401; Interrogation_Position=12329; Antisense; GACAGGACTTTATAGCTGCCGCAGT
>probe:Drosophila_2:1641442_a_at:151:575; Interrogation_Position=12399; Antisense; GGCGGTAATCCGGAACAGCGATATC
>probe:Drosophila_2:1641442_a_at:167:399; Interrogation_Position=12443; Antisense; GACACATTGTGATCGCTAAGCGGGA
>probe:Drosophila_2:1641442_a_at:548:525; Interrogation_Position=12464; Antisense; GGGACGAAAACACCGCCATTCTAGA
>probe:Drosophila_2:1641442_a_at:158:645; Interrogation_Position=12483; Antisense; TCTAGAGGTTGATCGCATGCTGCAT
>probe:Drosophila_2:1641442_a_at:544:635; Interrogation_Position=12495; Antisense; TCGCATGCTGCATTCGGGTGAAACC
>probe:Drosophila_2:1641442_a_at:76:83; Interrogation_Position=12536; Antisense; AGTCGATGAAGCTGCCGGGCAATGT
>probe:Drosophila_2:1641442_a_at:356:361; Interrogation_Position=12554; Antisense; GCAATGTTTTTGTCGGTGGCGCTCC
>probe:Drosophila_2:1641442_a_at:116:629; Interrogation_Position=12576; Antisense; TCCTGACCTCGAGGTGTTTACGGGT
>probe:Drosophila_2:1641442_a_at:432:289; Interrogation_Position=12596; Antisense; CGGGTTTCCGATACAAGCACAATTT
>probe:Drosophila_2:1641442_a_at:345:613; Interrogation_Position=12620; Antisense; TGAACGGCTGCATTGTGGTCGTCGA
>probe:Drosophila_2:1641442_a_at:650:13; Interrogation_Position=12664; Antisense; ATTAATCTTAGTTCTGCTGCCGTTA
>probe:Drosophila_2:1641442_a_at:583:549; Interrogation_Position=12691; Antisense; GGAGTGAATGCCAACGTCTGTCCCG
>probe:Drosophila_2:1641442_a_at:501:201; Interrogation_Position=12743; Antisense; AACCGCCAGTCGTCTGAGGACACAA

Paste this into a BLAST search page for me
GACAGGACTTTATAGCTGCCGCAGTGGCGGTAATCCGGAACAGCGATATCGACACATTGTGATCGCTAAGCGGGAGGGACGAAAACACCGCCATTCTAGATCTAGAGGTTGATCGCATGCTGCATTCGCATGCTGCATTCGGGTGAAACCAGTCGATGAAGCTGCCGGGCAATGTGCAATGTTTTTGTCGGTGGCGCTCCTCCTGACCTCGAGGTGTTTACGGGTCGGGTTTCCGATACAAGCACAATTTTGAACGGCTGCATTGTGGTCGTCGAATTAATCTTAGTTCTGCTGCCGTTAGGAGTGAATGCCAACGTCTGTCCCGAACCGCCAGTCGTCTGAGGACACAA

Full Affymetrix probeset data:

Annotations for 1641442_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720