FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1641452_a_at:

>probe:Drosophila_2:1641452_a_at:617:165; Interrogation_Position=5044; Antisense; AAATGAAACGCACACGCTCAAGCCT
>probe:Drosophila_2:1641452_a_at:570:337; Interrogation_Position=5059; Antisense; GCTCAAGCCTAATACTGTTATACTG
>probe:Drosophila_2:1641452_a_at:401:545; Interrogation_Position=5128; Antisense; GGATCGAAACGCTTGCAATTAACTG
>probe:Drosophila_2:1641452_a_at:253:657; Interrogation_Position=5159; Antisense; TAAGACATTTGAGTCGGGCCCTTGT
>probe:Drosophila_2:1641452_a_at:395:519; Interrogation_Position=5174; Antisense; GGGCCCTTGTTATACGGACGTATGC
>probe:Drosophila_2:1641452_a_at:371:305; Interrogation_Position=5198; Antisense; CCAGTAGAACAGTGGCCGCGCCGAA
>probe:Drosophila_2:1641452_a_at:594:299; Interrogation_Position=5216; Antisense; CGCCGAACCGATCTAGCATTTAACT
>probe:Drosophila_2:1641452_a_at:556:595; Interrogation_Position=5291; Antisense; TGTGTTGTATTTTGACCCCACACCA
>probe:Drosophila_2:1641452_a_at:316:257; Interrogation_Position=5309; Antisense; CACACCACCTTGTAACTACGTTTAT
>probe:Drosophila_2:1641452_a_at:552:147; Interrogation_Position=5323; Antisense; ACTACGTTTATACGCCTGCTTTTCG
>probe:Drosophila_2:1641452_a_at:497:11; Interrogation_Position=5382; Antisense; ATTCTTTATGCCTTTTAACAGTTGA
>probe:Drosophila_2:1641452_a_at:134:27; Interrogation_Position=5422; Antisense; ATAGCAACATTTTCTACCCACTTGT
>probe:Drosophila_2:1641452_a_at:212:233; Interrogation_Position=5463; Antisense; AATGCAGTTTTTGTTGCCTACTTAT
>probe:Drosophila_2:1641452_a_at:635:467; Interrogation_Position=5475; Antisense; GTTGCCTACTTATTCGGGAGTCGAA

Paste this into a BLAST search page for me
AAATGAAACGCACACGCTCAAGCCTGCTCAAGCCTAATACTGTTATACTGGGATCGAAACGCTTGCAATTAACTGTAAGACATTTGAGTCGGGCCCTTGTGGGCCCTTGTTATACGGACGTATGCCCAGTAGAACAGTGGCCGCGCCGAACGCCGAACCGATCTAGCATTTAACTTGTGTTGTATTTTGACCCCACACCACACACCACCTTGTAACTACGTTTATACTACGTTTATACGCCTGCTTTTCGATTCTTTATGCCTTTTAACAGTTGAATAGCAACATTTTCTACCCACTTGTAATGCAGTTTTTGTTGCCTACTTATGTTGCCTACTTATTCGGGAGTCGAA

Full Affymetrix probeset data:

Annotations for 1641452_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720