FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1641476_a_at:

>probe:Drosophila_2:1641476_a_at:716:445; Interrogation_Position=1061; Antisense; GATGCTTTCGAACTTGTAACCGGCT
>probe:Drosophila_2:1641476_a_at:587:659; Interrogation_Position=1077; Antisense; TAACCGGCTCCTTAGTAGCTACTTA
>probe:Drosophila_2:1641476_a_at:661:515; Interrogation_Position=1106; Antisense; GTGTCTAGCTTTTAATGTTCATACC
>probe:Drosophila_2:1641476_a_at:408:471; Interrogation_Position=1122; Antisense; GTTCATACCGCGTATACTTACCAAA
>probe:Drosophila_2:1641476_a_at:320:715; Interrogation_Position=1173; Antisense; TTCGATCAGTGGAAAGCCGTCGCGT
>probe:Drosophila_2:1641476_a_at:338:27; Interrogation_Position=1232; Antisense; ATACCCAGGGCTTGTCCTTAAGAGT
>probe:Drosophila_2:1641476_a_at:401:381; Interrogation_Position=1307; Antisense; GAACGTGCCACCTGTTTTGGTGTGA
>probe:Drosophila_2:1641476_a_at:609:309; Interrogation_Position=1390; Antisense; GCCAATCTCTGGCAACACTTTTGTA
>probe:Drosophila_2:1641476_a_at:529:325; Interrogation_Position=830; Antisense; GCGAGACGAACTACAGTGCCTGCAT
>probe:Drosophila_2:1641476_a_at:516:653; Interrogation_Position=875; Antisense; TCAATGGAGTGATTTCCCGATGCCG
>probe:Drosophila_2:1641476_a_at:658:409; Interrogation_Position=905; Antisense; GACGCACGCAGCTCTACAGAAAGTG
>probe:Drosophila_2:1641476_a_at:631:507; Interrogation_Position=927; Antisense; GTGCATGAGCAATCCGTAAACCAAT
>probe:Drosophila_2:1641476_a_at:477:219; Interrogation_Position=972; Antisense; AAGTCCTTCGCTTGTCCTTGTTATG
>probe:Drosophila_2:1641476_a_at:322:705; Interrogation_Position=992; Antisense; TTATGCTACCGTTTTTCTCTATCCA

Paste this into a BLAST search page for me
GATGCTTTCGAACTTGTAACCGGCTTAACCGGCTCCTTAGTAGCTACTTAGTGTCTAGCTTTTAATGTTCATACCGTTCATACCGCGTATACTTACCAAATTCGATCAGTGGAAAGCCGTCGCGTATACCCAGGGCTTGTCCTTAAGAGTGAACGTGCCACCTGTTTTGGTGTGAGCCAATCTCTGGCAACACTTTTGTAGCGAGACGAACTACAGTGCCTGCATTCAATGGAGTGATTTCCCGATGCCGGACGCACGCAGCTCTACAGAAAGTGGTGCATGAGCAATCCGTAAACCAATAAGTCCTTCGCTTGTCCTTGTTATGTTATGCTACCGTTTTTCTCTATCCA

Full Affymetrix probeset data:

Annotations for 1641476_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720