FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1641484_a_at:

>probe:Drosophila_2:1641484_a_at:160:705; Interrogation_Position=2529; Antisense; TTATCTGTCCAATCTCAGCCGGCAG
>probe:Drosophila_2:1641484_a_at:335:119; Interrogation_Position=2552; Antisense; AGCTGTCTATGCTGCAACGCGTCAT
>probe:Drosophila_2:1641484_a_at:463:359; Interrogation_Position=2565; Antisense; GCAACGCGTCATCACTAAACAAAGA
>probe:Drosophila_2:1641484_a_at:486:213; Interrogation_Position=2633; Antisense; AAGAGAGAGGCCATACAGATCGAAG
>probe:Drosophila_2:1641484_a_at:564:371; Interrogation_Position=2654; Antisense; GAAGGCATTACATTCCATTGCAATT
>probe:Drosophila_2:1641484_a_at:518:7; Interrogation_Position=2665; Antisense; ATTCCATTGCAATTAACGGCTTTTA
>probe:Drosophila_2:1641484_a_at:68:687; Interrogation_Position=2727; Antisense; TATAGGCCATAAGCGTTGGCGCTCT
>probe:Drosophila_2:1641484_a_at:111:207; Interrogation_Position=2737; Antisense; AAGCGTTGGCGCTCTATCATAAACC
>probe:Drosophila_2:1641484_a_at:61:37; Interrogation_Position=2752; Antisense; ATCATAAACCATTCAGCTTCTGTAC
>probe:Drosophila_2:1641484_a_at:500:713; Interrogation_Position=2763; Antisense; TTCAGCTTCTGTACAACAATCGATT
>probe:Drosophila_2:1641484_a_at:56:267; Interrogation_Position=2795; Antisense; CTAACGCAAATGTCAACCCAACTTC
>probe:Drosophila_2:1641484_a_at:10:707; Interrogation_Position=2867; Antisense; TTAGCCGTCACGAAATCAAAGAACC
>probe:Drosophila_2:1641484_a_at:183:689; Interrogation_Position=2977; Antisense; TATATTTATGTGCTCGCTGTTCGGC
>probe:Drosophila_2:1641484_a_at:365:471; Interrogation_Position=2995; Antisense; GTTCGGCTAGAGACTCACCTATGTA

Paste this into a BLAST search page for me
TTATCTGTCCAATCTCAGCCGGCAGAGCTGTCTATGCTGCAACGCGTCATGCAACGCGTCATCACTAAACAAAGAAAGAGAGAGGCCATACAGATCGAAGGAAGGCATTACATTCCATTGCAATTATTCCATTGCAATTAACGGCTTTTATATAGGCCATAAGCGTTGGCGCTCTAAGCGTTGGCGCTCTATCATAAACCATCATAAACCATTCAGCTTCTGTACTTCAGCTTCTGTACAACAATCGATTCTAACGCAAATGTCAACCCAACTTCTTAGCCGTCACGAAATCAAAGAACCTATATTTATGTGCTCGCTGTTCGGCGTTCGGCTAGAGACTCACCTATGTA

Full Affymetrix probeset data:

Annotations for 1641484_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720