FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1641487_a_at:

>probe:Drosophila_2:1641487_a_at:333:213; Interrogation_Position=1466; Antisense; AAGAGCGTGCGCTACTGCTACTTGA
>probe:Drosophila_2:1641487_a_at:237:145; Interrogation_Position=1479; Antisense; ACTGCTACTTGAAGGCTGTGGCCGA
>probe:Drosophila_2:1641487_a_at:585:681; Interrogation_Position=1526; Antisense; TATGGACTGCACTATATTGGCCCGG
>probe:Drosophila_2:1641487_a_at:673:77; Interrogation_Position=1560; Antisense; AGGTTATCCAGGGATTCGCTGCCGC
>probe:Drosophila_2:1641487_a_at:434:319; Interrogation_Position=1580; Antisense; GCCGCTTTGAAGTCTGGCCTGACTA
>probe:Drosophila_2:1641487_a_at:407:581; Interrogation_Position=1594; Antisense; TGGCCTGACTATTAACACGCTGATC
>probe:Drosophila_2:1641487_a_at:686:593; Interrogation_Position=1744; Antisense; TGGGACGTGTCGAAGCCGCTTGCTC
>probe:Drosophila_2:1641487_a_at:310:629; Interrogation_Position=1767; Antisense; TCCACCCGAAATCCCGTAGATGAAT
>probe:Drosophila_2:1641487_a_at:678:443; Interrogation_Position=1785; Antisense; GATGAATGGTTGTTGTCGCGGCCCA
>probe:Drosophila_2:1641487_a_at:569:575; Interrogation_Position=1804; Antisense; GGCCCAGCGATCGATGAGTTCAATA
>probe:Drosophila_2:1641487_a_at:469:653; Interrogation_Position=1823; Antisense; TCAATAGTTCCGTTTCGTTTCCACA
>probe:Drosophila_2:1641487_a_at:532:707; Interrogation_Position=1849; Antisense; TTAACACCCAACACAATAGCTCTGC
>probe:Drosophila_2:1641487_a_at:644:559; Interrogation_Position=1907; Antisense; GGAACGACACCAGTGGAACTACCCG
>probe:Drosophila_2:1641487_a_at:86:303; Interrogation_Position=1961; Antisense; CCGCCGACATGCACTCAAAATTTTG

Paste this into a BLAST search page for me
AAGAGCGTGCGCTACTGCTACTTGAACTGCTACTTGAAGGCTGTGGCCGATATGGACTGCACTATATTGGCCCGGAGGTTATCCAGGGATTCGCTGCCGCGCCGCTTTGAAGTCTGGCCTGACTATGGCCTGACTATTAACACGCTGATCTGGGACGTGTCGAAGCCGCTTGCTCTCCACCCGAAATCCCGTAGATGAATGATGAATGGTTGTTGTCGCGGCCCAGGCCCAGCGATCGATGAGTTCAATATCAATAGTTCCGTTTCGTTTCCACATTAACACCCAACACAATAGCTCTGCGGAACGACACCAGTGGAACTACCCGCCGCCGACATGCACTCAAAATTTTG

Full Affymetrix probeset data:

Annotations for 1641487_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720