FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1641504_s_at:

>probe:Drosophila_2:1641504_s_at:19:239; Interrogation_Position=2560; Antisense; AATCTGATTGTGCAACTGGGAACCG
>probe:Drosophila_2:1641504_s_at:336:631; Interrogation_Position=2597; Antisense; TCCTCAGCTTCATCACCAGCAAAAT
>probe:Drosophila_2:1641504_s_at:302:23; Interrogation_Position=2620; Antisense; ATAGGGCAGCAACATGTGCAGCAGC
>probe:Drosophila_2:1641504_s_at:96:511; Interrogation_Position=2650; Antisense; GTGCAACACATGCAACATCTGCTGC
>probe:Drosophila_2:1641504_s_at:116:193; Interrogation_Position=2720; Antisense; AACTATTCGAGTTAAGCACCCAACT
>probe:Drosophila_2:1641504_s_at:631:299; Interrogation_Position=2744; Antisense; TCCCCTCTTAAGTGTGACCGACAAG
>probe:Drosophila_2:1641504_s_at:404:411; Interrogation_Position=2759; Antisense; GACCGACAAGTAGTGTTTTAGCCAT
>probe:Drosophila_2:1641504_s_at:151:669; Interrogation_Position=2796; Antisense; TACTCCTAAGCGTAAATCTAGTTTA
>probe:Drosophila_2:1641504_s_at:460:161; Interrogation_Position=2852; Antisense; ACAATGAATTCAGTCGTCGAGTGCA
>probe:Drosophila_2:1641504_s_at:375:75; Interrogation_Position=2905; Antisense; AGGAGTTAACTCTTTTGCATGATAA
>probe:Drosophila_2:1641504_s_at:23:41; Interrogation_Position=2939; Antisense; ATCTGCATCTGCATGTGATGTTCAC
>probe:Drosophila_2:1641504_s_at:408:513; Interrogation_Position=2953; Antisense; GTGATGTTCACACCATACTTACTGT
>probe:Drosophila_2:1641504_s_at:589:29; Interrogation_Position=2990; Antisense; ATAACCTACCTATATGCTGTAAACT
>probe:Drosophila_2:1641504_s_at:438:149; Interrogation_Position=3015; Antisense; ACTTAAGCTGCGTTCTCTTGTGAAA

Paste this into a BLAST search page for me
AATCTGATTGTGCAACTGGGAACCGTCCTCAGCTTCATCACCAGCAAAATATAGGGCAGCAACATGTGCAGCAGCGTGCAACACATGCAACATCTGCTGCAACTATTCGAGTTAAGCACCCAACTTCCCCTCTTAAGTGTGACCGACAAGGACCGACAAGTAGTGTTTTAGCCATTACTCCTAAGCGTAAATCTAGTTTAACAATGAATTCAGTCGTCGAGTGCAAGGAGTTAACTCTTTTGCATGATAAATCTGCATCTGCATGTGATGTTCACGTGATGTTCACACCATACTTACTGTATAACCTACCTATATGCTGTAAACTACTTAAGCTGCGTTCTCTTGTGAAA

Full Affymetrix probeset data:

Annotations for 1641504_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720