FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1641523_at:

>probe:Drosophila_2:1641523_at:290:589; Interrogation_Position=147; Antisense; TGGTTTTAGACGGTCCTCCGCCTCT
>probe:Drosophila_2:1641523_at:217:697; Interrogation_Position=151; Antisense; TTTAGACGGTCCTCCGCCTCTGTAT
>probe:Drosophila_2:1641523_at:696:641; Interrogation_Position=169; Antisense; TCTGTATCTCCTCGCATAGGCAGCT
>probe:Drosophila_2:1641523_at:67:625; Interrogation_Position=180; Antisense; TCGCATAGGCAGCTCCCGCGTTTCT
>probe:Drosophila_2:1641523_at:422:641; Interrogation_Position=207; Antisense; TCTCGTCGACCCTGCGCCTATGGTT
>probe:Drosophila_2:1641523_at:436:625; Interrogation_Position=219; Antisense; TGCGCCTATGGTTCTCACCAAGACA
>probe:Drosophila_2:1641523_at:201:65; Interrogation_Position=226; Antisense; ATGGTTCTCACCAAGACAGTTTCAG
>probe:Drosophila_2:1641523_at:62:713; Interrogation_Position=230; Antisense; TTCTCACCAAGACAGTTTCAGCCTA
>probe:Drosophila_2:1641523_at:691:205; Interrogation_Position=238; Antisense; AAGACAGTTTCAGCCTACTTTATGC
>probe:Drosophila_2:1641523_at:141:125; Interrogation_Position=249; Antisense; AGCCTACTTTATGCTGTCATCCTTG
>probe:Drosophila_2:1641523_at:604:667; Interrogation_Position=253; Antisense; TACTTTATGCTGTCATCCTTGCTCC
>probe:Drosophila_2:1641523_at:289:339; Interrogation_Position=295; Antisense; GCTATGCATCCCTGCCTTACGCTGT
>probe:Drosophila_2:1641523_at:140:707; Interrogation_Position=311; Antisense; TTACGCTGTCAGTGCCCACTCGTCG
>probe:Drosophila_2:1641523_at:69:143; Interrogation_Position=328; Antisense; ACTCGTCGTCGTCGGCATCCTGATA

Paste this into a BLAST search page for me
TGGTTTTAGACGGTCCTCCGCCTCTTTTAGACGGTCCTCCGCCTCTGTATTCTGTATCTCCTCGCATAGGCAGCTTCGCATAGGCAGCTCCCGCGTTTCTTCTCGTCGACCCTGCGCCTATGGTTTGCGCCTATGGTTCTCACCAAGACAATGGTTCTCACCAAGACAGTTTCAGTTCTCACCAAGACAGTTTCAGCCTAAAGACAGTTTCAGCCTACTTTATGCAGCCTACTTTATGCTGTCATCCTTGTACTTTATGCTGTCATCCTTGCTCCGCTATGCATCCCTGCCTTACGCTGTTTACGCTGTCAGTGCCCACTCGTCGACTCGTCGTCGTCGGCATCCTGATA

Full Affymetrix probeset data:

Annotations for 1641523_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720