FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1641564_a_at:

>probe:Drosophila_2:1641564_a_at:472:163; Interrogation_Position=1297; Antisense; AAATTTCGGCACTGGCTATCAGCAA
>probe:Drosophila_2:1641564_a_at:414:331; Interrogation_Position=1332; Antisense; GCGGACCATCCAAGCACAACAATAT
>probe:Drosophila_2:1641564_a_at:710:51; Interrogation_Position=1359; Antisense; ATGCAAACCGCATGAATCCTTACTC
>probe:Drosophila_2:1641564_a_at:426:13; Interrogation_Position=1408; Antisense; ATATACGGGCTACAACGCTGGACCA
>probe:Drosophila_2:1641564_a_at:207:415; Interrogation_Position=1428; Antisense; GACCACTGCCGCCTAATGGAAGCGT
>probe:Drosophila_2:1641564_a_at:109:69; Interrogation_Position=1473; Antisense; AGGCTGTTGGCGTATCCAATGGCTC
>probe:Drosophila_2:1641564_a_at:225:23; Interrogation_Position=1528; Antisense; ATATCGCCGCTAGATTGGATGCTCT
>probe:Drosophila_2:1641564_a_at:288:3; Interrogation_Position=1541; Antisense; ATTGGATGCTCTTTGGGCGGCTAAA
>probe:Drosophila_2:1641564_a_at:492:393; Interrogation_Position=1579; Antisense; GACACTCTTTAGTAAGCTCGTTCAT
>probe:Drosophila_2:1641564_a_at:236:337; Interrogation_Position=1594; Antisense; GCTCGTTCATAAGCTAGGCCACACT
>probe:Drosophila_2:1641564_a_at:317:69; Interrogation_Position=1609; Antisense; AGGCCACACTCGCTTAGAGTTACTA
>probe:Drosophila_2:1641564_a_at:276:659; Interrogation_Position=1645; Antisense; TAACGCATTGTCTCTCTATCATAGG
>probe:Drosophila_2:1641564_a_at:715:115; Interrogation_Position=1700; Antisense; AGCTATACCATTGATTACCCTACGA
>probe:Drosophila_2:1641564_a_at:689:649; Interrogation_Position=1715; Antisense; TACCCTACGATTGACCTAAGCTATG

Paste this into a BLAST search page for me
AAATTTCGGCACTGGCTATCAGCAAGCGGACCATCCAAGCACAACAATATATGCAAACCGCATGAATCCTTACTCATATACGGGCTACAACGCTGGACCAGACCACTGCCGCCTAATGGAAGCGTAGGCTGTTGGCGTATCCAATGGCTCATATCGCCGCTAGATTGGATGCTCTATTGGATGCTCTTTGGGCGGCTAAAGACACTCTTTAGTAAGCTCGTTCATGCTCGTTCATAAGCTAGGCCACACTAGGCCACACTCGCTTAGAGTTACTATAACGCATTGTCTCTCTATCATAGGAGCTATACCATTGATTACCCTACGATACCCTACGATTGACCTAAGCTATG

Full Affymetrix probeset data:

Annotations for 1641564_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720