FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1641566_s_at:

>probe:Drosophila_2:1641566_s_at:171:241; Interrogation_Position=2006; Antisense; AATAACTAACATACCCGTCACAGCG
>probe:Drosophila_2:1641566_s_at:712:27; Interrogation_Position=2016; Antisense; ATACCCGTCACAGCGATAAAGTTGA
>probe:Drosophila_2:1641566_s_at:45:389; Interrogation_Position=2064; Antisense; GAAAAGTGCCTTTGCTGACAGCGAA
>probe:Drosophila_2:1641566_s_at:200:483; Interrogation_Position=2112; Antisense; GTATACTTGCATTTCAGAGTTGCGA
>probe:Drosophila_2:1641566_s_at:381:455; Interrogation_Position=2145; Antisense; GATACAAAAGCATTACCTACTGTTT
>probe:Drosophila_2:1641566_s_at:443:481; Interrogation_Position=2194; Antisense; GTATCGCAATATACTGTTAATCAGG
>probe:Drosophila_2:1641566_s_at:422:363; Interrogation_Position=2218; Antisense; GAATTGAACACCTGGTCTACGCACT
>probe:Drosophila_2:1641566_s_at:254:537; Interrogation_Position=2231; Antisense; GGTCTACGCACTCAGCTAAATATTT
>probe:Drosophila_2:1641566_s_at:536:385; Interrogation_Position=2322; Antisense; GAACAGTTTGTTCAATGGCAGCCCT
>probe:Drosophila_2:1641566_s_at:561:321; Interrogation_Position=2342; Antisense; GCCCTGGCCTGCTAATATTTTAAAT
>probe:Drosophila_2:1641566_s_at:362:403; Interrogation_Position=2376; Antisense; GAGAGAACTTACATATTCATACATG
>probe:Drosophila_2:1641566_s_at:256:387; Interrogation_Position=2428; Antisense; GAACAACTCACTCAATACTTCATTG
>probe:Drosophila_2:1641566_s_at:501:55; Interrogation_Position=2462; Antisense; ATGAACACACAAATAGCGGTAGGCT
>probe:Drosophila_2:1641566_s_at:525:339; Interrogation_Position=2484; Antisense; GCTAAGCTTAAATGATACTGTGTAC

Paste this into a BLAST search page for me
AATAACTAACATACCCGTCACAGCGATACCCGTCACAGCGATAAAGTTGAGAAAAGTGCCTTTGCTGACAGCGAAGTATACTTGCATTTCAGAGTTGCGAGATACAAAAGCATTACCTACTGTTTGTATCGCAATATACTGTTAATCAGGGAATTGAACACCTGGTCTACGCACTGGTCTACGCACTCAGCTAAATATTTGAACAGTTTGTTCAATGGCAGCCCTGCCCTGGCCTGCTAATATTTTAAATGAGAGAACTTACATATTCATACATGGAACAACTCACTCAATACTTCATTGATGAACACACAAATAGCGGTAGGCTGCTAAGCTTAAATGATACTGTGTAC

Full Affymetrix probeset data:

Annotations for 1641566_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720