FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1641603_s_at:

>probe:Drosophila_2:1641603_s_at:701:357; Interrogation_Position=1994; Antisense; GCAAACAATCGCTTTCCGTGTATTC
>probe:Drosophila_2:1641603_s_at:613:9; Interrogation_Position=2015; Antisense; ATTCCCAACTGTGTGTACGAGCTGC
>probe:Drosophila_2:1641603_s_at:320:671; Interrogation_Position=2030; Antisense; TACGAGCTGCAAGGCCTGGAGATCC
>probe:Drosophila_2:1641603_s_at:590:639; Interrogation_Position=2093; Antisense; TCGGGTCTGCAGAACATGCGACGTT
>probe:Drosophila_2:1641603_s_at:160:661; Interrogation_Position=2140; Antisense; TAACGACATCGAGACAGTGCCACCA
>probe:Drosophila_2:1641603_s_at:702:119; Interrogation_Position=2199; Antisense; AGCTGGTGGGCAATCCATTTCGACA
>probe:Drosophila_2:1641603_s_at:512:53; Interrogation_Position=2243; Antisense; ATGAAGGGCACTGACGCCATCATGT
>probe:Drosophila_2:1641603_s_at:662:35; Interrogation_Position=2261; Antisense; ATCATGTCGTATTTGCGCGATCGCA
>probe:Drosophila_2:1641603_s_at:573:297; Interrogation_Position=2276; Antisense; CGCGATCGCATACCCACATAGAAGA
>probe:Drosophila_2:1641603_s_at:95:421; Interrogation_Position=2299; Antisense; GAGCAATTCACACCGTTTTTTGAGA
>probe:Drosophila_2:1641603_s_at:91:397; Interrogation_Position=2368; Antisense; GAAATTGATAGATCCGCTCGACCAT
>probe:Drosophila_2:1641603_s_at:332:509; Interrogation_Position=2477; Antisense; GTGCATCAACCAACCAAACTAGTCT
>probe:Drosophila_2:1641603_s_at:273:87; Interrogation_Position=2497; Antisense; AGTCTGCATGCCACAATACCTAATG
>probe:Drosophila_2:1641603_s_at:126:233; Interrogation_Position=2518; Antisense; AATGCACGTTGTTAATCCTGGCTGA

Paste this into a BLAST search page for me
GCAAACAATCGCTTTCCGTGTATTCATTCCCAACTGTGTGTACGAGCTGCTACGAGCTGCAAGGCCTGGAGATCCTCGGGTCTGCAGAACATGCGACGTTTAACGACATCGAGACAGTGCCACCAAGCTGGTGGGCAATCCATTTCGACAATGAAGGGCACTGACGCCATCATGTATCATGTCGTATTTGCGCGATCGCACGCGATCGCATACCCACATAGAAGAGAGCAATTCACACCGTTTTTTGAGAGAAATTGATAGATCCGCTCGACCATGTGCATCAACCAACCAAACTAGTCTAGTCTGCATGCCACAATACCTAATGAATGCACGTTGTTAATCCTGGCTGA

Full Affymetrix probeset data:

Annotations for 1641603_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720