FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1641652_a_at:

>probe:Drosophila_2:1641652_a_at:308:473; Interrogation_Position=1804; Antisense; GTTAACCCTATATCTGTAGGATCAG
>probe:Drosophila_2:1641652_a_at:261:365; Interrogation_Position=1833; Antisense; GAATATCTCATTGTTTGCTTACGTG
>probe:Drosophila_2:1641652_a_at:679:3; Interrogation_Position=1842; Antisense; ATTGTTTGCTTACGTGTCATGCGAC
>probe:Drosophila_2:1641652_a_at:488:495; Interrogation_Position=1857; Antisense; GTCATGCGACGTAAATTATTTTGTT
>probe:Drosophila_2:1641652_a_at:278:563; Interrogation_Position=1972; Antisense; GGAATTACACATTTTCTACATATTA
>probe:Drosophila_2:1641652_a_at:184:265; Interrogation_Position=2017; Antisense; CAGAAGACTTTATATGGGAGCTAAT
>probe:Drosophila_2:1641652_a_at:23:49; Interrogation_Position=2043; Antisense; ATGAATAAAACTCCACAAGCTGTAA
>probe:Drosophila_2:1641652_a_at:630:479; Interrogation_Position=2087; Antisense; GTATATGCGTGTGCTTTAAGGACTA
>probe:Drosophila_2:1641652_a_at:171:561; Interrogation_Position=2115; Antisense; GGAAACCGATATATTGGCAATGCAA
>probe:Drosophila_2:1641652_a_at:477:667; Interrogation_Position=2158; Antisense; TACAGGCCTTATAGCAATTGAGATT
>probe:Drosophila_2:1641652_a_at:675:459; Interrogation_Position=2179; Antisense; GATTACTACCTCAACAACAACTGAT
>probe:Drosophila_2:1641652_a_at:104:21; Interrogation_Position=2255; Antisense; ATATAGCCGAGCGTAACTGAGCACT
>probe:Drosophila_2:1641652_a_at:225:493; Interrogation_Position=2267; Antisense; GTAACTGAGCACTGCCAGCTTTAAG
>probe:Drosophila_2:1641652_a_at:325:165; Interrogation_Position=2292; Antisense; AAATCAATTACGACCAAGCACCAAC

Paste this into a BLAST search page for me
GTTAACCCTATATCTGTAGGATCAGGAATATCTCATTGTTTGCTTACGTGATTGTTTGCTTACGTGTCATGCGACGTCATGCGACGTAAATTATTTTGTTGGAATTACACATTTTCTACATATTACAGAAGACTTTATATGGGAGCTAATATGAATAAAACTCCACAAGCTGTAAGTATATGCGTGTGCTTTAAGGACTAGGAAACCGATATATTGGCAATGCAATACAGGCCTTATAGCAATTGAGATTGATTACTACCTCAACAACAACTGATATATAGCCGAGCGTAACTGAGCACTGTAACTGAGCACTGCCAGCTTTAAGAAATCAATTACGACCAAGCACCAAC

Full Affymetrix probeset data:

Annotations for 1641652_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720