FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1641654_a_at:

>probe:Drosophila_2:1641654_a_at:384:709; Interrogation_Position=3844; Antisense; TTACAAGATTGCTCCAATGCCGCCA
>probe:Drosophila_2:1641654_a_at:125:41; Interrogation_Position=3943; Antisense; ATCTGACGAGCAGTCGGCCATACGC
>probe:Drosophila_2:1641654_a_at:501:577; Interrogation_Position=3958; Antisense; GGCCATACGCAACTGGCGTCAGGAT
>probe:Drosophila_2:1641654_a_at:239:497; Interrogation_Position=3975; Antisense; GTCAGGATTGTGTTTACGCCCGCAG
>probe:Drosophila_2:1641654_a_at:102:383; Interrogation_Position=4022; Antisense; GAACAGCAGCGGCACAACCGTTCGT
>probe:Drosophila_2:1641654_a_at:661:717; Interrogation_Position=4042; Antisense; TTCGTCGGGTCAGCGTGTCCAGCAG
>probe:Drosophila_2:1641654_a_at:711:617; Interrogation_Position=4101; Antisense; TGCAGGCGGCCCAATTGATGGACGA
>probe:Drosophila_2:1641654_a_at:204:605; Interrogation_Position=4132; Antisense; TGATATGAGGATCGGCCTTTCGCCG
>probe:Drosophila_2:1641654_a_at:209:99; Interrogation_Position=4164; Antisense; AGAGTGTACTGCTCCAAAGGCGCCT
>probe:Drosophila_2:1641654_a_at:133:121; Interrogation_Position=4200; Antisense; AGCGGGCCAACGATCTGTCTGAGTA
>probe:Drosophila_2:1641654_a_at:98:39; Interrogation_Position=4212; Antisense; ATCTGTCTGAGTACTGCGAGCCGGC
>probe:Drosophila_2:1641654_a_at:650:647; Interrogation_Position=4288; Antisense; TCACGCACATTCTCTTAAAACCAAC
>probe:Drosophila_2:1641654_a_at:159:267; Interrogation_Position=4317; Antisense; CAGTTCTATCATTCTTTTTGGTGCA
>probe:Drosophila_2:1641654_a_at:388:163; Interrogation_Position=4389; Antisense; AAATTCAATTGATTCCGCCACTGCA

Paste this into a BLAST search page for me
TTACAAGATTGCTCCAATGCCGCCAATCTGACGAGCAGTCGGCCATACGCGGCCATACGCAACTGGCGTCAGGATGTCAGGATTGTGTTTACGCCCGCAGGAACAGCAGCGGCACAACCGTTCGTTTCGTCGGGTCAGCGTGTCCAGCAGTGCAGGCGGCCCAATTGATGGACGATGATATGAGGATCGGCCTTTCGCCGAGAGTGTACTGCTCCAAAGGCGCCTAGCGGGCCAACGATCTGTCTGAGTAATCTGTCTGAGTACTGCGAGCCGGCTCACGCACATTCTCTTAAAACCAACCAGTTCTATCATTCTTTTTGGTGCAAAATTCAATTGATTCCGCCACTGCA

Full Affymetrix probeset data:

Annotations for 1641654_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720