FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1641656_at:

>probe:Drosophila_2:1641656_at:596:47; Interrogation_Position=296; Antisense; ATGCCAAGGGCCAAGTCCTGCGTAA
>probe:Drosophila_2:1641656_at:128:97; Interrogation_Position=325; Antisense; AGAGGCTTCGGCTTTGTTACCAACA
>probe:Drosophila_2:1641656_at:111:355; Interrogation_Position=362; Antisense; GCACCAATTGTACACTCGCAGGATT
>probe:Drosophila_2:1641656_at:512:349; Interrogation_Position=379; Antisense; GCAGGATTCGCTTACATCGCCAATT
>probe:Drosophila_2:1641656_at:442:605; Interrogation_Position=437; Antisense; TGATTTGTGTGTTCATGTCGTCCTT
>probe:Drosophila_2:1641656_at:104:631; Interrogation_Position=457; Antisense; TCCTTGGGCTGCTATCAACTGATCA
>probe:Drosophila_2:1641656_at:559:529; Interrogation_Position=483; Antisense; GGGATATCAGCGCAGTTTTCCCACA
>probe:Drosophila_2:1641656_at:247:601; Interrogation_Position=522; Antisense; TGTATACGAAAGTCTGCCGCCATTT
>probe:Drosophila_2:1641656_at:137:169; Interrogation_Position=550; Antisense; AAATGGAAATTTCCCGCTGTCAGCG
>probe:Drosophila_2:1641656_at:630:597; Interrogation_Position=567; Antisense; TGTCAGCGTCTGTGAACTGGCCTAC
>probe:Drosophila_2:1641656_at:708:133; Interrogation_Position=582; Antisense; ACTGGCCTACCGTGGAAATCTGTTT
>probe:Drosophila_2:1641656_at:692:585; Interrogation_Position=695; Antisense; TGGAGACCGGTGTATCGATCCTTCT
>probe:Drosophila_2:1641656_at:54:631; Interrogation_Position=713; Antisense; TCCTTCTCTTTCCTGCTTTATACAA
>probe:Drosophila_2:1641656_at:159:51; Interrogation_Position=788; Antisense; ATGCGTGTGCAAAGTGTCCTTCTGA

Paste this into a BLAST search page for me
ATGCCAAGGGCCAAGTCCTGCGTAAAGAGGCTTCGGCTTTGTTACCAACAGCACCAATTGTACACTCGCAGGATTGCAGGATTCGCTTACATCGCCAATTTGATTTGTGTGTTCATGTCGTCCTTTCCTTGGGCTGCTATCAACTGATCAGGGATATCAGCGCAGTTTTCCCACATGTATACGAAAGTCTGCCGCCATTTAAATGGAAATTTCCCGCTGTCAGCGTGTCAGCGTCTGTGAACTGGCCTACACTGGCCTACCGTGGAAATCTGTTTTGGAGACCGGTGTATCGATCCTTCTTCCTTCTCTTTCCTGCTTTATACAAATGCGTGTGCAAAGTGTCCTTCTGA

Full Affymetrix probeset data:

Annotations for 1641656_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720