FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1641690_a_at:

>probe:Drosophila_2:1641690_a_at:203:1; Interrogation_Position=2006; Antisense; ATAAGGGACTTCACCGGCGTATGGA
>probe:Drosophila_2:1641690_a_at:657:219; Interrogation_Position=2078; Antisense; AAGTCCTCGATACTCACTTTGGTGC
>probe:Drosophila_2:1641690_a_at:654:507; Interrogation_Position=2099; Antisense; GTGCGATTGACCAACTTTGCGAAAC
>probe:Drosophila_2:1641690_a_at:145:693; Interrogation_Position=2114; Antisense; TTTGCGAAACGTTGAGCCTCGACGA
>probe:Drosophila_2:1641690_a_at:530:429; Interrogation_Position=2137; Antisense; GAGTTTGTCCCTTGCCAAAGCTATG
>probe:Drosophila_2:1641690_a_at:202:117; Interrogation_Position=2155; Antisense; AGCTATGCCAAGACATTCTCACATT
>probe:Drosophila_2:1641690_a_at:674:59; Interrogation_Position=2182; Antisense; ATGTTTCTATATATCTACTCTCCGG
>probe:Drosophila_2:1641690_a_at:305:669; Interrogation_Position=2197; Antisense; TACTCTCCGGATATCAACTCACTAT
>probe:Drosophila_2:1641690_a_at:389:247; Interrogation_Position=2266; Antisense; AATTGCAGGTCCTTCAGCATACCAT
>probe:Drosophila_2:1641690_a_at:699:27; Interrogation_Position=2284; Antisense; ATACCATCTACGAACTCCAGATCAG
>probe:Drosophila_2:1641690_a_at:437:547; Interrogation_Position=2312; Antisense; GGATGTCTAAGTCGCGCTCGCTTAG
>probe:Drosophila_2:1641690_a_at:696:337; Interrogation_Position=2327; Antisense; GCTCGCTTAGCTTGTATTCTGGTTT
>probe:Drosophila_2:1641690_a_at:664:107; Interrogation_Position=2387; Antisense; AGAACGTTCCCAATTTGCTACTGAC
>probe:Drosophila_2:1641690_a_at:606:39; Interrogation_Position=2474; Antisense; ATCGAACTCTGTGCGGTAATCTTTT

Paste this into a BLAST search page for me
ATAAGGGACTTCACCGGCGTATGGAAAGTCCTCGATACTCACTTTGGTGCGTGCGATTGACCAACTTTGCGAAACTTTGCGAAACGTTGAGCCTCGACGAGAGTTTGTCCCTTGCCAAAGCTATGAGCTATGCCAAGACATTCTCACATTATGTTTCTATATATCTACTCTCCGGTACTCTCCGGATATCAACTCACTATAATTGCAGGTCCTTCAGCATACCATATACCATCTACGAACTCCAGATCAGGGATGTCTAAGTCGCGCTCGCTTAGGCTCGCTTAGCTTGTATTCTGGTTTAGAACGTTCCCAATTTGCTACTGACATCGAACTCTGTGCGGTAATCTTTT

Full Affymetrix probeset data:

Annotations for 1641690_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720