FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1641738_a_at:

>probe:Drosophila_2:1641738_a_at:487:215; Interrogation_Position=1003; Antisense; AAGTTTCATATGTACCACCGTCAAG
>probe:Drosophila_2:1641738_a_at:260:261; Interrogation_Position=1018; Antisense; CACCGTCAAGTTTATTCGCTTCTCA
>probe:Drosophila_2:1641738_a_at:627:633; Interrogation_Position=1033; Antisense; TCGCTTCTCACGAAAAGTTGCGTTA
>probe:Drosophila_2:1641738_a_at:486:661; Interrogation_Position=1087; Antisense; TAAACGTTTTCCATAGATCCCCAAT
>probe:Drosophila_2:1641738_a_at:433:449; Interrogation_Position=1102; Antisense; GATCCCCAATCGAACTTAGTCCGTA
>probe:Drosophila_2:1641738_a_at:95:669; Interrogation_Position=1125; Antisense; TACTCCCTACACTAGACAGACCGAA
>probe:Drosophila_2:1641738_a_at:446:55; Interrogation_Position=1195; Antisense; ATGAGTGTACGTGTGTGTCCAGGAA
>probe:Drosophila_2:1641738_a_at:582:25; Interrogation_Position=1253; Antisense; ATAGGCAACTTTTCAGCAGCACTGT
>probe:Drosophila_2:1641738_a_at:267:511; Interrogation_Position=1276; Antisense; GTGAATTCAGATCGCTTACATCGCA
>probe:Drosophila_2:1641738_a_at:589:241; Interrogation_Position=1346; Antisense; AATAGCTTTACGAGCTCACAGCCCA
>probe:Drosophila_2:1641738_a_at:582:713; Interrogation_Position=1439; Antisense; TTCATGTCCAAGTTGCAGGTCCAGA
>probe:Drosophila_2:1641738_a_at:618:131; Interrogation_Position=1484; Antisense; ACCGTTTTCTTCGTAGCTGTTATCT
>probe:Drosophila_2:1641738_a_at:179:393; Interrogation_Position=955; Antisense; GAAAGTTAGATACTCGTCGCCATTA
>probe:Drosophila_2:1641738_a_at:364:29; Interrogation_Position=964; Antisense; ATACTCGTCGCCATTAGCCTAAAAG

Paste this into a BLAST search page for me
AAGTTTCATATGTACCACCGTCAAGCACCGTCAAGTTTATTCGCTTCTCATCGCTTCTCACGAAAAGTTGCGTTATAAACGTTTTCCATAGATCCCCAATGATCCCCAATCGAACTTAGTCCGTATACTCCCTACACTAGACAGACCGAAATGAGTGTACGTGTGTGTCCAGGAAATAGGCAACTTTTCAGCAGCACTGTGTGAATTCAGATCGCTTACATCGCAAATAGCTTTACGAGCTCACAGCCCATTCATGTCCAAGTTGCAGGTCCAGAACCGTTTTCTTCGTAGCTGTTATCTGAAAGTTAGATACTCGTCGCCATTAATACTCGTCGCCATTAGCCTAAAAG

Full Affymetrix probeset data:

Annotations for 1641738_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720